BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006A02SP1|AL425454
(1041 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig655 1716 0.0
>3x_Contig655
Length = 2459
Score = 1716 bits (863), Expect = 0.0
Identities = 893/903 (98%), Gaps = 2/903 (0%)
Strand = Plus / Plus
Query: 127 agtcaaacgcattttagatttgatattccaattcttcaaagcaggcaacttgacaaattc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 agtcaaacgcattttagatttgatattccaattcttcaaagcaggcaacttgacaaattc 64
Query: 187 tggtatttctttcttgaaacgaacatttgggaccttaaaatcatagaatatatcaagcag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tggtatttctttcttgaaacgaacatttgggaccttaaaatcatagaatatatcaagcag 124
Query: 247 aggcaacacacaattggraaatcgtagatcccttctagagtgccaaacgttcaaataatg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aggcaacacacaattggaaaatcgtagatcccttctagagtgccaaacgttcaaataatg 184
Query: 307 aaaaaacatttgtgaatcgataactttggggtcagcagagttcattatatcatcagccct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaaaacatttgtgaatcgataactttggggtcagcagagttcattatatcatcagccct 244
Query: 367 ttgaatggcttccactgcatctgtratcttcgcacatccaataagtagttgcgtgtacgc 426
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 245 ttgaatggcttccactgcatctgtaatcttcgcacatccaataagtagttgcgtgtacgc 304
Query: 427 rattgcatctttttttatacctttgggtctcaaatcaaaacatttgaacaggtaactagg 486
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aattgcatctttttttatacctttgggtctcaaatcaaaacatttgaacaggtaactagg 364
Query: 487 gtcgttagagttcgccaacgcacttaatgcagcgttaaaatttatattattgagtctttc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcgttagagttcgccaacgcacttaatgcagcgttaaaatttatattattgagtctttc 424
Query: 547 atcttcaaccaattttaaaactatcttcaccactcgttctgcaactttgacagarattgg 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 425 atcttcaaccaattttaaaactatcttcaccactcgttctgcaactttgacagaaattgg 484
Query: 607 ttctggcaaccttgccaaccctttgaacaaatttgtttcagtgtattcattgggaggtat 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttctggcaaccttgccaaccctttgaacaaatttgtttcagtgtattcattgggaggtat 544
Query: 667 ttgccacttctttctccaagaatataaatccacagcggaatggctatctttttcaacttc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttgccacttctttctccaagaatataaatccacagcggaatggctatctttttcaacttc 604
Query: 727 tagataatgtgtcattaatgtgttcattccagctgcaccatttggtccagcaagctttat 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tagataatgtgtcattaatgtgttcattccagctgcaccatttggtccagcaagctttat 664
Query: 787 aagaaataaagccttttgcaactggcctctcttacaaaatttcgcaacatcgcgttccac 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aagaaataaagccttttgcaactggcctctcttacaaaatttcgcaacatcgcgttccac 724
Query: 847 caatattgaattttttagttgaggtctagatatacctagtatagtatacattaatctttt 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 caatattgaattttttagttgaggtctagatatacctagtatagtatacattaatctttt 784
Query: 907 atcgttagcgacagaaagaatgctcgtatcatcgtccggaggtgggtcctactttgatag 966
||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 785 atcgttagcgacagaaagaatgctcgtatcatcgtcc-gaagttggtcctactttgatag 843
Query: 967 acttatcaagattagtaattttgtgtctcccttttaagaattcattcgccttccttaatg 1026
||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct: 844 acttatcaagattagtaattttgtgtctcccttttaagatttcattcg-ctttcttaatg 902
Query: 1027 gaa 1029
|||
Sbjct: 903 gaa 905
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8641
Number of Sequences: 1807
Number of extensions: 8641
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 1041
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1025
effective length of database: 10,329,639
effective search space: 10587879975
effective search space used: 10587879975
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)